Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849626.1_cds_XP_016510864.1_23659
CDS Infomation

[gene=LOC107828121] [db_xref=GeneID:107828121] [protein=pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like] [protein_id=XP_016510864.1] [location=complement(74987..76555)] [gbkey=CDS]
Sequence

ATGAAGTTCTATGCTAGAAAACTGCCCTTTAGATGCCTATCTGTTTCTCTCCCATTTGGG
GTTTGTAACATTTCTAATGTACCATGTAAAAGTTGCTTTAGCTACTTTTCCACCTTGTCT
AGTGTGTTTTGTTCCGTAAGTCCCCAGTTTGCTGGCGATAGAATTCCAGGCGAGCAACAG
AAATGCATGATCTTGGGAAGAGATTCTGATGTTAATGTTGTACTTGCTAGAATAAGTCCT
GGAAGCAGTGAGGCTGAGGTTCTCCAGTCATTGCTTTCTGATCCGGCTTGTGATTCCATA
CATATCACTGATAACTTTGTTGATTGGGTGCTTTATCGCTTCAAAGATGACTGGAAGTCT
GCACTTGGTGCTTTTAGATGGGCACAATCACGTCCTGGCTACAATCCCTCACCAGAATTG
TACGACAAGTTGGTAGATATACTGGGAAAGATGAAGAAAATGGAAAAGATGCACTCATTG
ATAGACGAAATGCATGCAAACCATCTTGTTTCTCTTAACACAATAGCAAAAGTTATGAGA
AGGTTTGCAGGTGCAGGAGAGTGGAAAGAAGCAGTGAGGACATTTGACGAGTTGGGAAAA
TTCGGTTTGGAGAAGAATGCAGAATCAATGAATCTGTTACTAGACACTTTGTGCAAAGAA
AATAAAGTCCAACAGGCGCGTGAAATTTTTTCCGAGCTCAAGTCGCATATCCCACCAAAT
GCAAACACGTTTAACGTTTTTATTCATGGTTGGTGCAAAGTTAATCGGGTAGAAGAAGCG
TACTGGACAATTCAGGAGATGAAAGGCAATGGTTGTTCTCCTTGCGTCATCAGCTACTCA
ACCATCATCATGTCCTACTGCCAGCAATTTAACTTCCAGAGGGTCTATGAGCTGCTTGAT
GAAATGCAAGGACTGGGATGTGTACCAAATGTTATCACTTTCACCACTATCATGTGTTTC
TTGACAAAATCAGGGGCATTTGAGGAAGCCCTTAAGATTGCTGAGAGGATGAAATCAGTT
GGTTGTAAACCTGATACACTTTTCTACAACGCTCTGATTCATACATTAGGCAGGGCGCAC
CGATTACAAGAAGCTACTCGTGTCTTGAAGGTTGAAATGCCCAGAAATGGTGTTCAACCT
AATACATCGACGTACAATACTATCATTGCCATGTTTTGCCATCATTTGCAAGAGGAAAGA
GCGCTAGAATTTTTCAGGGACCTGGAAAGTTCACCATATTGTAAACCTGATGTTCAGTCA
TACTTTCCACTGCTCAAGTTGTGCTTTAAAGTTGGGAAGACAGATGATTTCCTGAATAAA
TTGGTGAATGCCATGGTTAATAAGCATCATCTAAGTCTTGATCTATCAAGTTATACACTT
CTTATCCATGGTTTGTGCAGAGCAAATAAATGTGAATGGGCCTATCTTGTTTTTGAGGAT
ATGATCCGCCAAGAGATTACTCCTCGATACAAGACATGCAGTGTGCTACTGCAGGAAATC
AAACAAAAGAATATGCATGATGCTGCCGATAGGATTGAATTGTTCATGAAGAAAATGAAG
ACCTCCTGA

Peptide Sequence

PEP ID

XP_016510864.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like [Nicotiana tabacum]
Sequence

MKFYARKLPFRCLSVSLPFGVCNISNVPCKSCFSYFSTLSSVFCSVSPQFAGDRIPGEQQ
KCMILGRDSDVNVVLARISPGSSEAEVLQSLLSDPACDSIHITDNFVDWVLYRFKDDWKS
ALGAFRWAQSRPGYNPSPELYDKLVDILGKMKKMEKMHSLIDEMHANHLVSLNTIAKVMR
RFAGAGEWKEAVRTFDELGKFGLEKNAESMNLLLDTLCKENKVQQAREIFSELKSHIPPN
ANTFNVFIHGWCKVNRVEEAYWTIQEMKGNGCSPCVISYSTIIMSYCQQFNFQRVYELLD
EMQGLGCVPNVITFTTIMCFLTKSGAFEEALKIAERMKSVGCKPDTLFYNALIHTLGRAH
RLQEATRVLKVEMPRNGVQPNTSTYNTIIAMFCHHLQEERALEFFRDLESSPYCKPDVQS
YFPLLKLCFKVGKTDDFLNKLVNAMVNKHHLSLDLSSYTLLIHGLCRANKCEWAYLVFED
MIRQEITPRYKTCSVLLQEIKQKNMHDAADRIELFMKKMKTS

Transcript Sequence

Gene sequence data has not been registered.